2CFZ Hydrolase date Feb 26, 2006
title Crystal Structure Of Sdsa1, An Alkylsulfatase From Pseudomon Aeruginosa, In Complex With 1-Dodecanol
authors G.Hagelueken, T.M.Adams, L.Wiehlmann, U.Widow, H.Kolmar, B.Tuemml D.W.Heinz, W.D.Schubert
compound source
Molecule: Sds Hydrolase Sdsa1
Chain: A
Synonym: Sdsa21 Probable Beta-Lactamase
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 208964
Strain: Pao1
Atcc: 15692
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65 2 2
R_factor 0.160 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.323 86.323 367.594 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.05 Å
ligand 1DO, PEG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe crystal structure of SdsA1, an alkylsulfatase from Pseudomonas aeruginosa, defines a third class of sulfatases., Hagelueken G, Adams TM, Wiehlmann L, Widow U, Kolmar H, Tummler B, Heinz DW, Schubert WD, Proc Natl Acad Sci U S A. 2006 May 16;103(20):7631-6. Epub 2006 May 9. PMID:16684886
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (2cfz.pdb1.gz) 232 Kb
  • LPC: Ligand-Protein Contacts for 2CFZ
  • CSU: Contacts of Structural Units for 2CFZ
  • Likely Quarternary Molecular Structure file(s) for 2CFZ
  • Structure Factors (408 Kb)
  • Retrieve 2CFZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CFZ from S2C, [Save to disk]
  • Re-refined 2cfz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CFZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CFZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CFZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cfz_A] [2cfz]
  • SWISS-PROT database: [Q9I5I9]
  • Domain organization of [Q9I5I9_PSEAE] by SWISSPFAM
  • Domain found in 2CFZ: [Lactamase_B ] by SMART
  • Other resources with information on 2CFZ
  • Community annotation for 2CFZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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