2CG1 Oxidoreductase date Feb 27, 2006
title Agao In Complex With Wc11b (Ru-Wire Inhibitor, 11-Carbon Lin Set B)
authors D.B.Langley, A.P.Duff, H.C.Freeman, J.M.Guss, G.A.Juda, D.M.Doole S.M.Contakes, N.W.Halpern-Manners, A.R.Dunn, H.B.Gray
compound source
Molecule: Phenylethylamine Oxidase
Chain: A
Fragment: Agao Holoenzyme, Residues 3-638
Synonym: Amine Oxidase, Copper Amine Oxidase
Ec: 1.4.3.6
Engineered: Yes
Other_details: Residue A382 Was An Active Site Tyrosine Res Which Was Self-Processed To Become A Tpq
Organism_scientific: Arthrobacter Globiformis
Organism_taxid: 1665
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pet-3c (Novagen)
Expression_system_plasmid: Pagao2
symmetry Space Group: C 1 2 1
R_factor 0.160 R_Free 0.179
crystal
cell
length a length b length c angle alpha angle beta angle gamma
157.919 63.042 92.067 90.00 112.19 90.00
method X-Ray Diffractionresolution 1.67 Å
ligand 11R, CU, GOL, NA, SO4, TPQ enzyme Oxidoreductase E.C.1.4.3.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceEnantiomer-specific binding of ruthenium(II) molecular wires by the amine oxidase of Arthrobacter globiformis., Langley DB, Brown DE, Cheruzel LE, Contakes SM, Duff AP, Hilmer KM, Dooley DM, Gray HB, Guss JM, Freeman HC, J Am Chem Soc. 2008 Jun 25;130(25):8069-78. Epub 2008 May 29. PMID:18507382
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (204 Kb) [Save to disk]
  • Biological Unit Coordinates (2cg1.pdb1.gz) 388 Kb
  • LPC: Ligand-Protein Contacts for 2CG1
  • CSU: Contacts of Structural Units for 2CG1
  • Likely Quarternary Molecular Structure file(s) for 2CG1
  • Structure Factors (1261 Kb)
  • Retrieve 2CG1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CG1 from S2C, [Save to disk]
  • Re-refined 2cg1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CG1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CG1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CG1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cg1] [2cg1_A]
  • SWISS-PROT database: [P46881]
  • Domain organization of [PAOX_ARTGO] by SWISSPFAM
  • Other resources with information on 2CG1
  • Community annotation for 2CG1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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