2CHW Transferase Inhibitor date Mar 16, 2006
title A Pharmacological Map Of The Pi3-K Family Defines A Role For Alpha In Signaling: The Structure Of Complex Of Phosphoinos Kinase Gamma With Inhibitor Pik-39
authors Z.A.Knight, B.Gonzalez, M.E.Feldman, E.R.Zunder, D.D.Goldenberg, O.Williams, R.Loewith, D.Stokoe, A.Balla, B.Toth, T.Balla, W.A.We R.L.Williams, K.M.Shokat
compound source
Molecule: Phosphatidylinositol-4,5-Bisphosphate 3-Kinase Ca Subunit Gamma Isoform;
Chain: A
Fragment: Human Pi-3k Gamma Catalytic Subunit, Residues 144
Synonym: Phosphoinositide 3-Kinase, Pi3-Kinase P110 Subunit Ptdins-3-Kinase P110, Pi3k, Pi3kgamma;
Ec: 2.7.1.137, 2.7.1.153
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pvl1393
symmetry Space Group: C 1 2 1
R_factor 0.237 R_Free 0.299
crystal
cell
length a length b length c angle alpha angle beta angle gamma
143.804 67.523 106.311 90.00 95.45 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand 039 BindingDB enzyme Transferase E.C.2.7.1.137 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA pharmacological map of the PI3-K family defines a role for p110alpha in insulin signaling., Knight ZA, Gonzalez B, Feldman ME, Zunder ER, Goldenberg DD, Williams O, Loewith R, Stokoe D, Balla A, Toth B, Balla T, Weiss WA, Williams RL, Shokat KM, Cell. 2006 May 19;125(4):733-47. Epub 2006 Apr 27. PMID:16647110
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (142 Kb) [Save to disk]
  • Biological Unit Coordinates (2chw.pdb1.gz) 135 Kb
  • LPC: Ligand-Protein Contacts for 2CHW
  • CSU: Contacts of Structural Units for 2CHW
  • Likely Quarternary Molecular Structure file(s) for 2CHW
  • Structure Factors (727 Kb)
  • Retrieve 2CHW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CHW from S2C, [Save to disk]
  • Re-refined 2chw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CHW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CHW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CHW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2chw] [2chw_A]
  • SWISS-PROT database: [P48736]
  • Domain organization of [PK3CG_HUMAN] by SWISSPFAM
  • Domains found in 2CHW: [PI3K_C2] [PI3K_rbd] [PI3Ka] [PI3Kc ] by SMART
  • Other resources with information on 2CHW
  • Community annotation for 2CHW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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