2CUJ Transcription date May 26, 2005
title Solution Structure Of Swirm Domain Of Mouse Transcriptional Like
authors M.Yoneyama, T.Umehara, M.Sato, N.Tochio, S.Koshiba, M.Inoue, A.Tan T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics In (Rsgi)
compound source
Molecule: Transcriptional Adaptor 2-Like
Chain: A
Fragment: Swirm Domain
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Tada2l
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P041018-15
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Primary referenceStructural and Functional Differences of SWIRM Domain Subtypes., Yoneyama M, Tochio N, Umehara T, Koshiba S, Inoue M, Yabuki T, Aoki M, Seki E, Matsuda T, Watanabe S, Tomo Y, Nishimura Y, Harada T, Terada T, Shirouzu M, Hayashizaki Y, Ohara O, Tanaka A, Kigawa T, Yokoyama S, J Mol Biol. 2007 May 25;369(1):222-38. Epub 2007 Mar 19. PMID:17428495
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (560 Kb) [Save to disk]
  • Biological Unit Coordinates (2cuj.pdb1.gz) 28 Kb
  • CSU: Contacts of Structural Units for 2CUJ
  • Retrieve 2CUJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CUJ from S2C, [Save to disk]
    • View 2CUJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CUJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CUJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cuj_A] [2cuj]
  • SWISS-PROT database: [Q8CHV6]
  • Domain organization of [TAD2A_MOUSE] by SWISSPFAM
    • Other resources with information on 2CUJ
  • Community annotation for 2CUJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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