2CWE Gene Regulation date Jun 20, 2005
title Crystal Structure Of Hypothetical Transcriptional Regulator Ph1932 From Pyrococcus Horikoshii Ot3
authors R.Arai, S.Kishishita, M.Kukimoto-Niino, H.Wang, M.Sugawara, M.Shi S.Yokoyama, Riken Structural Genomicsproteomics Initiative
compound source
Molecule: Hypothetical Transcription Regulator Protein, Ph1
Chain: A
Engineered: Yes
Organism_scientific: Pyrococcus Horikoshii
Organism_taxid: 70601
Strain: Ot3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: H 3 2
R_factor 0.211 R_Free 0.290
crystal
cell
length a length b length c angle alpha angle beta angle gamma
90.658 90.658 131.871 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (2cwe.pdb1.gz) 64 Kb
  • CSU: Contacts of Structural Units for 2CWE
  • Likely Quarternary Molecular Structure file(s) for 2CWE
  • Structure Factors (43 Kb)
  • Retrieve 2CWE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CWE from S2C, [Save to disk]
  • Re-refined 2cwe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CWE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CWE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CWE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cwe_A] [2cwe]
  • SWISS-PROT database: [O59595]
  • Domain organization of [O59595_PYRHO] by SWISSPFAM
  • Domain found in 2CWE: [HTH_ARSR ] by SMART
  • Other resources with information on 2CWE
  • Community annotation for 2CWE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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