2CWJ Hydrolase date Jun 21, 2005
title Crystal Structure Of Ape1501, A Putative Endonuclease From A Pernix
authors C.Takemoto-Hori, K.Suetsugu-Hanawa, K.Murayama, M.Shirouzu, S.Yo Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Putative Endonuclease
Chain: A
Ec: 3.1.-.-
Engineered: Yes
 Organism_scientific: Aeropyrum Pernix
Organism_taxid: 272557
Strain: K1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De2)Prare
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: I 21 3
R_factor 0.326 R_Free 0.337
crystal
cell
length a length b length c angle alpha angle beta angle gamma
109.026 109.026 109.026 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.60 Å
ligand
enzyme Hydrolase E.C.3.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (2cwj.pdb1.gz) 17 Kb
  • Biological Unit Coordinates (2cwj.pdb2.gz) 49 Kb
  • CSU: Contacts of Structural Units for 2CWJ
  • Likely Quarternary Molecular Structure file(s) for 2CWJ
  • Retrieve 2CWJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CWJ from S2C, [Save to disk]
    • View 2CWJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2CWJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CWJ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cwj] [2cwj_A]
  • SWISS-PROT database: [Q9YBU8]
  • Domain organization of [Q9YBU8_AERPE] by SWISSPFAM
    • Other resources with information on 2CWJ
  • Community annotation for 2CWJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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