2CWV Oxidoreductase date Jun 26, 2005
title Product Schiff-Base Intermediate Of Copper Amine Oxidase Fro Arthrobacter Globiformis
authors Y.C.Chiu, T.Okajima, T.Murakawa, M.Uchida, M.Taki, S.Hirota, M.Kim H.Yamaguchi, Y.Kawano, N.Kamiya, S.Kuroda, H.Hayashi, Y.Yamamoto K.Tanizawa
compound source
Molecule: Phenylethylamine Oxidase
Chain: A, B
Synonym: Amine Oxidase
Ec: 1.4.3.6
Engineered: Yes
Mutation: Yes
Organism_scientific: Arthrobacter Globiformis
Organism_taxid: 1665
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Cd03
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pepo-02-D298a
symmetry Space Group: I 1 2 1
R_factor 0.201 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
157.702 62.849 184.125 90.00 112.43 90.00
method X-Ray Diffractionresolution 1.85 Å
ligand 2TY, CU enzyme Oxidoreductase E.C.1.4.3.6 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceKinetic and structural studies on the catalytic role of the aspartic acid residue conserved in copper amine oxidase., Chiu YC, Okajima T, Murakawa T, Uchida M, Taki M, Hirota S, Kim M, Yamaguchi H, Kawano Y, Kamiya N, Kuroda S, Hayashi H, Yamamoto Y, Tanizawa K, Biochemistry. 2006 Apr 4;45(13):4105-20. PMID:16566584
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (223 Kb) [Save to disk]
  • Biological Unit Coordinates (2cwv.pdb1.gz) 213 Kb
  • LPC: Ligand-Protein Contacts for 2CWV
  • CSU: Contacts of Structural Units for 2CWV
  • Likely Quarternary Molecular Structure file(s) for 2CWV
  • Structure Factors (1311 Kb)
  • Retrieve 2CWV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2CWV from S2C, [Save to disk]
  • Re-refined 2cwv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2CWV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2CWV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2CWV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2cwv] [2cwv_A] [2cwv_B]
  • SWISS-PROT database: [P46881]
  • Domain organization of [PAOX_ARTGO] by SWISSPFAM
  • Other resources with information on 2CWV
  • Community annotation for 2CWV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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