2D9M Rna Binding Protein date Dec 12, 2005
title Solution Structure Of Ccch Type Zinc-Finger Domain 3 In Zinc Ccch-Type Domain Containing 7a
authors C.Abe, Y.Muto, M.Inoue, T.Kigawa, T.Terada, M.Shirouzu, S.Yokoyama Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Zinc Finger Ccch-Type Domain Containing Protein 7
Chain: A
Fragment: Ccch-Type Zinc Finger Motif
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zc3h7a
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050302-09
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (343 Kb) [Save to disk]
  • Biological Unit Coordinates (2d9m.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 2D9M
  • CSU: Contacts of Structural Units for 2D9M
  • Retrieve 2D9M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D9M from S2C, [Save to disk]
    • View 2D9M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2D9M
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2D9M, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d9m] [2d9m_A]
  • SWISS-PROT database: [Q8IWR0]
  • Domain organization of [Z3H7A_HUMAN] by SWISSPFAM
    • Other resources with information on 2D9M
  • Community annotation for 2D9M at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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