2D9Z Signaling Protein date Dec 13, 2005
title Solution Structure Of The Ph Domain Of Protein Kinase C, Nu Human
authors H.Li, T.Tomizawa, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Protein Kinase C, Nu Type
Chain: A
Fragment: Ph Domain
Synonym: Npkc-Nu, Protein Kinase Epk2
Ec: 2.7.1.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Prkcn, Epk2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P050711-24
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1 BRENDA
note 2D9Z is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (661 Kb) [Save to disk]
  • Biological Unit Coordinates (2d9z.pdb1.gz) 33 Kb
  • CSU: Contacts of Structural Units for 2D9Z
  • Retrieve 2D9Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2D9Z from S2C, [Save to disk]
    • View 2D9Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2D9Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2D9Z, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2d9z] [2d9z_A]
  • SWISS-PROT database: [O94806]
  • Domain organization of [KPCD3_HUMAN] by SWISSPFAM
  • Domain found in 2D9Z: [PH ] by SMART
    • Other resources with information on 2D9Z
  • Community annotation for 2D9Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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