2DEJ	Transferase	date	Feb 10, 2006
title	Crystal Structure Of Galaktokinase From Pyrococcus Horikoshi Amp-Pn And Galactose
authors	E.Inagaki, K.Sakamoto, A.Shinkai, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound		source
Molecule: Probable Galactokinase Chain: A Synonym: Galactose Kinase Ec: 2.7.1.6 Engineered: Yes		Organism_scientific: Pyrococcus Horikoshii Organism_taxid: 53953 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21-Codonplus(De3)-Ril Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11a
symmetry	Space Group: C 1 2 1	R_factor 0.187 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 105.945 38.997 81.188 90.00 109.60 90.00
method	X-Ray Diffraction	resolution	1.50 Å
ligand	APW, GLA	enzyme	Transferase E.C.2.7.1.6 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk] Biological Unit Coordinates (2dej.pdb1.gz) 62 Kb LPC: Ligand-Protein Contacts for 2DEJ CSU: Contacts of Structural Units for 2DEJ Likely Quarternary Molecular Structure file(s) for 2DEJ Structure Factors (413 Kb) Retrieve 2DEJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DEJ from S2C, [Save to disk] Re-refined 2dej structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DEJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2DEJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2DEJ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2dej] [2dej_A] SWISS-PROT database: [O58107] Domain organization of [GAL1_PYRHO] by SWISSPFAM

Other resources with information on 2DEJ

Community annotation for 2DEJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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