2DVL	Oxidoreductase	date	Jul 31, 2006
title	Crystal Structure Of Project Tt0160 From Thermus Thermophilu
authors	K.Shimizu, Riken Structural Genomicsproteomics Initiative (R
compound		source
Molecule: Acyl-Coa Dehydrogenase Chain: A, B Synonym: Acyl-Coa Dehydrogenase, Short-Chain Specific Engineered: Yes		Organism_scientific: Thermus Thermophilus Organism_taxid: 300852 Strain: Hb8 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 41 21 2	R_factor 0.193 R_Free 0.230
crystal cell	length a length b length c angle alpha angle beta angle gamma 116.479 116.479 149.394 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	FAD	enzyme
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk] Biological Unit Coordinates (2dvl.pdb1.gz) 121 Kb Biological Unit Coordinates (2dvl.pdb2.gz) 240 Kb LPC: Ligand-Protein Contacts for 2DVL CSU: Contacts of Structural Units for 2DVL Likely Quarternary Molecular Structure file(s) for 2DVL Structure Factors (1051 Kb) Retrieve 2DVL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2DVL from S2C, [Save to disk] Re-refined 2dvl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2DVL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2DVL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2DVL, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2dvl] [2dvl_B] [2dvl_A] SWISS-PROT database: [Q5SH14] Domain organization of [Q5SH14_THET8] by SWISSPFAM

Other resources with information on 2DVL

Community annotation for 2DVL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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