2DZJ Sugar Binding Protein date Sep 29, 2006
title 2dzjsolution Structure Of The N-Terminal Ubiquitin-Like Dom Human Synaptic Glycoprotein Sc2
authors C.Zhao, M.Yoneyama, S.Koshiba, S.Watanabe, T.Harada, T.Kigawa, S.Y Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Synaptic Glycoprotein Sc2
Chain: A
Fragment: Ubiquitin-Like Domain
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gpsn2
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060522-14
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (475 Kb) [Save to disk]
  • Biological Unit Coordinates (2dzj.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 2DZJ
  • Retrieve 2DZJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2DZJ from S2C, [Save to disk]
  • View 2DZJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2DZJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2DZJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2dzj] [2dzj_A]
  • SWISS-PROT database: [Q9NZ01]
  • Domain organization of [TECR_HUMAN] by SWISSPFAM
  • Other resources with information on 2DZJ
  • Community annotation for 2DZJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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