2E37	Oxidoreductase	date	Nov 21, 2006
title	Structure Of Tt0471 Protein From Thermus Thermophilus
authors	N.K.Lokanath, Riken Structural Genomicsproteomics Initiative
compound		source
Molecule: L-Lactate Dehydrogenase Chain: A, B, C, D, E, F, G, H Synonym: L-Ldh, Nad Binding Dehydrogenase Ec: 1.1.1.27 Engineered: Yes		Organism_scientific: Thermus Thermophilus Organism_taxid: 300852 Strain: Hb8 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-11a
symmetry	Space Group: C 1 2 1	R_factor 0.215 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 162.740 135.638 162.056 90.00 113.79 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	MSE, NAD, SO4	enzyme	Oxidoreductase E.C.1.1.1.27 BRENDA
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (396 Kb) [Save to disk] Biological Unit Coordinates (2e37.pdb1.gz) 196 Kb Biological Unit Coordinates (2e37.pdb2.gz) 196 Kb Biological Unit Coordinates (2e37.pdb3.gz) 103 Kb Biological Unit Coordinates (2e37.pdb4.gz) 196 Kb Biological Unit Coordinates (2e37.pdb5.gz) 198 Kb Biological Unit Coordinates (2e37.pdb6.gz) 201 Kb LPC: Ligand-Protein Contacts for 2E37 CSU: Contacts of Structural Units for 2E37 Likely Quarternary Molecular Structure file(s) for 2E37 Structure Factors (1194 Kb) Retrieve 2E37 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2E37 from S2C, [Save to disk] Re-refined 2e37 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2E37 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2E37

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2E37, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2e37_D] [2e37_G] [2e37] [2e37_B] [2e37_F] [2e37_C] [2e37_H] [2e37_E] [2e37_A] SWISS-PROT database: [P62055] Domain organization of [LDH_THET2] by SWISSPFAM

Other resources with information on 2E37

Community annotation for 2E37 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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