2E5R Dna Binding Protein date Dec 22, 2006
title Solution Structure Of The Zz Domain Of Dystrobrevin Alpha (Dystrobrevin-Alpha)
authors W.Dang, Y.Muto, M.Inoue, T.Kigawa, M.Shirouzu, T.Terada, S.Yokoyam Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Dystrobrevin Alpha
Chain: A
Fragment: Zz Domain
Synonym: Dystrobrevin-Alpha, Dystrophin-Related Protein 3
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Dtna
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060327-04
Other_details: Cell Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (316 Kb) [Save to disk]
  • Biological Unit Coordinates (2e5r.pdb1.gz) 16 Kb
  • LPC: Ligand-Protein Contacts for 2E5R
  • CSU: Contacts of Structural Units for 2E5R
  • Original NMR restraints for 2E5R from PDB
  • Retrieve 2E5R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2E5R from S2C, [Save to disk]
    • View 2E5R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2E5R
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2E5R, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2e5r_A] [2e5r]
  • SWISS-PROT database: [Q9Y4J8]
  • Domain organization of [DTNA_HUMAN] by SWISSPFAM
  • Domain found in 2E5R: [ZnF_ZZ ] by SMART
    • Other resources with information on 2E5R
  • Community annotation for 2E5R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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