2ECP Acarbose date Oct 27, 1998
title The Crystal Structure Of The E. Coli Maltodextrin Phosphoryl Complex
authors M.O'Reilly, K.A.Watson, L.N.Johnson
compound source
Molecule: Maltodextrin Phosphorylase
Chain: A, B
Synonym: Ecp, Malp
Ec: 2.4.1.1
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Cell_line: Delta Mala518
Tissue: Muscle
Cellular_location: Cytoplasm
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell_line: Delta Mala518
Expression_system_cellular_location: Cytoplasm
Expression_system_plasmid: Pmap101
symmetry Space Group: P 21 21 21
R_factor 0.241 R_Free 0.293
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.490 105.840 217.720 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.95 Å
ligand AC1, GLC, GOL, PLP enzyme Transferase E.C.2.4.1.1 BRENDA
related structures by homologous chain: 1AHP, 1E4O
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe crystal structure of the Escherichia coli maltodextrin phosphorylase-acarbose complex., O'Reilly M, Watson KA, Johnson LN, Biochemistry 1999 Apr 27;38(17):5337-45. PMID:10220320
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (262 Kb) [Save to disk]
  • Biological Unit Coordinates (2ecp.pdb1.gz) 255 Kb
  • LPC: Ligand-Protein Contacts for 2ECP
  • CSU: Contacts of Structural Units for 2ECP
  • Likely Quarternary Molecular Structure file(s) for 2ECP
  • Structure Factors (265 Kb)
  • Retrieve 2ECP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ECP from S2C, [Save to disk]
  • Re-refined 2ecp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ECP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ECP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ECP, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2ecpa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d2ecpb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ecp] [2ecp_B] [2ecp_A]
  • SWISS-PROT database: [P00490]
  • Domain organization of [PHSM_ECOLI] by SWISSPFAM
  • Other resources with information on 2ECP
  • Community annotation for 2ECP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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