2EE4 Hydrolase date Feb 15, 2007
title Solution Structure Of The Rhogap Domain From Human Rho Gtpas Activating Protein 5 Variant
authors T.Tomizawa, N.Tochio, S.Koshiba, S.Watanabe, T.Harada, T.Kigawa, S.Yokoyama, Riken Structural Genomicsproteomics Initiative
compound source
Molecule: Rho Gtpase Activating Protein 5 Variant
Chain: A
Fragment: Rhogap Domain
Ec: 3.6.5.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P060123-14
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.5.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1115 Kb) [Save to disk]
  • Biological Unit Coordinates (2ee4.pdb1.gz) 55 Kb
  • CSU: Contacts of Structural Units for 2EE4
  • Original NMR restraints for 2EE4 from PDB
  • Retrieve 2EE4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EE4 from S2C, [Save to disk]
  • View 2EE4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EE4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EE4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ee4] [2ee4_A]
  • SWISS-PROT database: [Q13017]
  • Domain organization of [RHG05_HUMAN] by SWISSPFAM
  • Domain found in 2EE4: [RhoGAP ] by SMART
  • Other resources with information on 2EE4
  • Community annotation for 2EE4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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