2EJ1 Hydrolase date Mar 14, 2007
title Crystal Structure Of Cel44a, Gh Family 44 Endoglucanase From Clostridium Thermocellum
authors Y.Kitago, S.Karita, N.Watanabe, K.Sakka, I.Tanaka
compound source
Molecule: Endoglucanase
Chain: A
Fragment: Tim-Like Barrel
Synonym: Glycoside Hydrolase
Ec: 3.2.1.4, 3.2.1.151
Engineered: Yes
Mutation: Yes
Organism_scientific: Clostridium Thermocellum
Organism_taxid: 1515
Strain: F1
Gene: Celj, Celj-Cel9d-Cel44a
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe-30
symmetry Space Group: P 21 21 21
R_factor 0.162 R_Free 0.185
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.898 59.095 171.330 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand BGC, CA, CL, GOL, ZN enzyme Hydrolase E.C.3.2.1.4 BRENDA
Primary referenceCrystal structure of Cel44A, a glycoside hydrolase family 44 endoglucanase from Clostridium thermocellum., Kitago Y, Karita S, Watanabe N, Kamiya M, Aizawa T, Sakka K, Tanaka I, J Biol Chem. 2007 Dec 7;282(49):35703-11. Epub 2007 Sep 28. PMID:17905739
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk]
  • Biological Unit Coordinates (2ej1.pdb1.gz) 93 Kb
  • LPC: Ligand-Protein Contacts for 2EJ1
  • CSU: Contacts of Structural Units for 2EJ1
  • Likely Quarternary Molecular Structure file(s) for 2EJ1
  • Structure Factors (742 Kb)
  • Retrieve 2EJ1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EJ1 from S2C, [Save to disk]
  • Re-refined 2ej1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2EJ1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EJ1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EJ1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ej1_A] [2ej1]
  • SWISS-PROT database: [P71140]
  • Domain organization of [P71140_CLOTM] by SWISSPFAM
  • Other resources with information on 2EJ1
  • Community annotation for 2EJ1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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