2ESW Signaling Protein date Oct 27, 2005
title Atomic Structure Of The N-Terminal Sh3 Domain Of Mouse Beta Activated Kinase (Pak)-Interacting Exchange Factor
authors Z.Rao
compound source
Molecule: Rho Guanine Nucleotide Exchange Factor 7
Chain: A, B
Fragment: Sh3 Domain
Synonym: Pak-Interacting Exchange Factor Beta, Beta-Pix, P8
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex6p-1
symmetry Space Group: P 32 2 1
R_factor 0.232 R_Free 0.254
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.287 88.287 40.558 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.01 Å
ligand CL, HG enzyme
Primary referenceCrystal structure of the N-terminal SH3 domain of mouse betaPIX, p21-activated kinase-interacting exchange factor., Li X, Liu X, Sun F, Gao J, Zhou H, Gao GF, Bartlam M, Rao Z, Biochem Biophys Res Commun. 2006 Jan 6;339(1):407-14. Epub 2005 Nov 14. PMID:16307729
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk]
  • Biological Unit Coordinates (2esw.pdb1.gz) 12 Kb
  • Biological Unit Coordinates (2esw.pdb2.gz) 12 Kb
  • Biological Unit Coordinates (2esw.pdb3.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 2ESW
  • CSU: Contacts of Structural Units for 2ESW
  • Likely Quarternary Molecular Structure file(s) for 2ESW
  • Structure Factors (319 Kb)
  • Retrieve 2ESW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ESW from S2C, [Save to disk]
  • Re-refined 2esw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ESW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ESW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ESW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2esw_B] [2esw] [2esw_A]
  • SWISS-PROT database: [Q9ES28]
  • Domain organization of [ARHG7_MOUSE] by SWISSPFAM
  • Domain found in 2ESW: [SH3 ] by SMART
  • Other resources with information on 2ESW
  • Community annotation for 2ESW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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