2ETM Transferase date Oct 27, 2005
title Crystal Structure Of Focal Adhesion Kinase Domain Complexed Pyrrolo [2,3-D] Pyrimidine Derivative
authors C.C.Lee
compound source
Molecule: Focal Adhesion Kinase 1
Chain: A, B
Fragment: Kinase Domain
Synonym: Fadk 1, Pp125fak, Protein- Tyrosine Kinase 2
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptk2, Fak, Fak1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf21
Expression_system_vector_type: Virus
Expression_system_plasmid: Pfastbachtb
symmetry Space Group: P 1
R_factor 0.211 R_Free 0.295
crystal
cell
length a length b length c angle alpha angle beta angle gamma
45.700 51.919 66.884 100.08 103.94 90.17
method X-Ray Diffractionresolution 2.30 Å
ligand 7PY BindingDB enzyme Transferase E.C.2.7.1.112 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (2etm.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (2etm.pdb2.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 2ETM
  • CSU: Contacts of Structural Units for 2ETM
  • Likely Quarternary Molecular Structure file(s) for 2ETM
  • Retrieve 2ETM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ETM from S2C, [Save to disk]
  • View 2ETM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ETM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ETM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2etm] [2etm_B] [2etm_A]
  • SWISS-PROT database: [Q05397]
  • Domain organization of [FAK1_HUMAN] by SWISSPFAM
  • Domain found in 2ETM: [TyrKc ] by SMART
  • Other resources with information on 2ETM
  • Community annotation for 2ETM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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