2EUT Oxidoreductase date Oct 29, 2005
title Cytochrome C Peroxidase (Ccp) In Complex With 2-Amino-4-Pico
authors R.Brenk, S.W.Vetter, S.E.Boyce, D.B.Goodin, B.K.Shoichet
compound source
Molecule: Cytochrome C Peroxidase
Chain: A
Ec: 1.11.1.5
Engineered: Yes
Mutation: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pt7 Ccp
symmetry Space Group: P 21 21 21
R_factor 0.143 R_Free 0.152
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.600 73.530 104.630 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.12 Å
ligand BVF, HEM enzyme Oxidoreductase E.C.1.11.1.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceProbing molecular docking in a charged model binding site., Brenk R, Vetter SW, Boyce SE, Goodin DB, Shoichet BK, J Mol Biol. 2006 Apr 14;357(5):1449-70. Epub 2006 Feb 2. PMID:16490206
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (2eut.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 2EUT
  • CSU: Contacts of Structural Units for 2EUT
  • Likely Quarternary Molecular Structure file(s) for 2EUT
  • Structure Factors (712 Kb)
  • Retrieve 2EUT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2EUT from S2C, [Save to disk]
  • Re-refined 2eut structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2EUT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2EUT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2EUT, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2eut_A] [2eut]
  • SWISS-PROT database: [P00431]
  • Domain organization of [CCPR_YEAST] by SWISSPFAM
  • Other resources with information on 2EUT
  • Community annotation for 2EUT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science