2F43	Hydrolase	date	Nov 22, 2005
title	Rat Liver F1-Atpase
authors	C.Chen, A.K.Saxena, W.N.Simcoke, D.N.Garboczi, P.L.Pedersen, Y.H.
compound		source
Molecule: Atp Synthase Alpha Chain, Mitochondrial Chain: A Ec: 3.6.3.14		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Organ: Liver
Molecule: Atp Synthase Beta Chain, Mitochondrial Chain: B Ec: 3.6.3.14		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Organ: Liver
Molecule: Atp Synthase Gamma Chain, Mitochondrial Chain: G Ec: 3.6.3.14		Organism_scientific: Rattus Norvegicus Organism_common: Norway Rat Organism_taxid: 10116 Organ: Liver
symmetry	Space Group: H 3 2	R_factor 0.306 R_Free 0.320
crystal cell	length a length b length c angle alpha angle beta angle gamma 144.567 144.567 362.982 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	ADP, ATP, MG, VO4	enzyme	Hydrolase E.C.3.6.3.14 BRENDA
Gene Ontology	Chain Function Process Component A B G
Primary reference	Mitochondrial ATP Synthase: CRYSTAL STRUCTURE OF THE CATALYTIC F1 UNIT IN A VANADATE-INDUCED TRANSITION-LIKE STATE AND IMPLICATIONS FOR MECHANISM., Chen C, Saxena AK, Simcoke WN, Garboczi DN, Pedersen PL, Ko YH, J Biol Chem. 2006 May 12;281(19):13777-83. Epub 2006 Mar 10. PMID:16531409

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (172 Kb) [Save to disk] Biological Unit Coordinates (2f43.pdb1.gz) 448 Kb LPC: Ligand-Protein Contacts for 2F43 CSU: Contacts of Structural Units for 2F43 Likely Quarternary Molecular Structure file(s) for 2F43 Structure Factors (295 Kb) Retrieve 2F43 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2F43 from S2C, [Save to disk] Re-refined 2f43 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2F43 in 3D

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Visual 3D analysis of 2F43

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2F43, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2f43_A] [2f43] [2f43_G] [2f43_B] SWISS-PROT database: [P15999] [P10719] [P35435] Domain organization of [ATPA_RAT] [ATPB_RAT] [ATPG_RAT] by SWISSPFAM Domain found in 2F43: [AAA ] by SMART

Other resources with information on 2F43

Community annotation for 2F43 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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