2F57	Transferase	date	Nov 25, 2005
title	Crystal Structure Of The Human P21-Activated Kinase 5
authors	J.Eswaran, A.Turnbull, E.Ugochukwu, E.Papagrigoriou, J.Bray, S.Da P.Savitsky, C.Smee, N.Burgess, O.Fedorov, P.Filippakopoulos, F.V C.Arrowsmith, J.Weigelt, M.Sundstrom, A.Edwards, S.Knapp, Struct Genomics Consortium (Sgc)
compound		source
Molecule: Serinethreonine-Protein Kinase Pak 7 Chain: A, B Fragment: Residues 425-719 Synonym: P21-Activated Kinase 7, Pak-7, Pak-5 Ec: 2.7.1.37 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Plic-Sgc1
symmetry	Space Group: C 1 2 1	R_factor 0.154 R_Free 0.185
crystal cell	length a length b length c angle alpha angle beta angle gamma 98.661 56.599 120.764 90.00 103.13 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	23D, SEP, TRS	enzyme	Transferase E.C.2.7.1.37 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal Structures of the p21-activated kinases PAK4, PAK5, and PAK6 reveal catalytic domain plasticity of active group II PAKs., Eswaran J, Lee WH, Debreczeni JE, Filippakopoulos P, Turnbull A, Fedorov O, Deacon SW, Peterson JR, Knapp S, Structure. 2007 Feb;15(2):201-13. PMID:17292838

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (114 Kb) [Save to disk] Biological Unit Coordinates (2f57.pdb1.gz) 52 Kb Biological Unit Coordinates (2f57.pdb2.gz) 57 Kb LPC: Ligand-Protein Contacts for 2F57 CSU: Contacts of Structural Units for 2F57 Likely Quarternary Molecular Structure file(s) for 2F57 Structure Factors (442 Kb) Retrieve 2F57 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2F57 from S2C, [Save to disk] Re-refined 2f57 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2F57 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2F57

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2F57, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2f57_A] [2f57] [2f57_B] SWISS-PROT database: [Q9P286] Domain organization of [PAK7_HUMAN] by SWISSPFAM Domain found in 2F57: [S_TKc ] by SMART

Other resources with information on 2F57

Community annotation for 2F57 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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