2F64	Transferase	date	Nov 28, 2005
title	Crystal Structure Of Nucleoside 2-Deoxyribosyltransferase Fr Trypanosoma Brucei At 1.6 A Resolution With 1-Methylquinoli One Bound
authors	J.Bosch, M.A.Robien, W.G.J.Hol, Structural Genomics Of Pathogen Protozoa Consortium (Sgpp)
compound		source
Molecule: Nucleoside 2-Deoxyribosyltransferase Chain: A, B Ec: 2.4.2.6 Engineered: Yes		Organism_scientific: Trypanosoma Brucei Organism_taxid: 5691 Gene: Tb05.30h13.400 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21star(De3) Expression_system_vector_type: T7 System Expression_system_plasmid: Pet14b
symmetry	Space Group: C 1 2 1	R_factor 0.165 R_Free 0.187
crystal cell	length a length b length c angle alpha angle beta angle gamma 59.827 75.351 87.048 90.00 90.01 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	12Q, GOL, MSE, SO4	enzyme	Transferase E.C.2.4.2.6 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Using fragment cocktail crystallography to assist inhibitor design of Trypanosoma brucei nucleoside 2-deoxyribosyltransferase., Bosch J, Robien MA, Mehlin C, Boni E, Riechers A, Buckner FS, Van Voorhis WC, Myler PJ, Worthey EA, DeTitta G, Luft JR, Lauricella A, Gulde S, Anderson LA, Kalyuzhniy O, Neely HM, Ross J, Earnest TN, Soltis M, Schoenfeld L, Zucker F, Merritt EA, Fan E, Verlinde CL, Hol WG, J Med Chem. 2006 Oct 5;49(20):5939-46. PMID:17004709

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (2f64.pdb1.gz) 61 Kb LPC: Ligand-Protein Contacts for 2F64 CSU: Contacts of Structural Units for 2F64 Likely Quarternary Molecular Structure file(s) for 2F64 Structure Factors (373 Kb) Retrieve 2F64 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2F64 from S2C, [Save to disk] Re-refined 2f64 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2F64 in 3D

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Visual 3D analysis of 2F64

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2F64, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2f64_B] [2f64_A] [2f64] SWISS-PROT database: [Q57VC7] Domain organization of [Q57VC7_9TRYP] by SWISSPFAM

Other resources with information on 2F64

Community annotation for 2F64 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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