2F6F	Hydrolase	date	Nov 29, 2005
title	The Structure Of The S295f Mutant Of Human Ptp1b
authors	J.Montalibet, K.Skorey, D.Mckay, G.Scapin, E.Asante-Appiah, B.P.K
compound		source
Molecule: Tyrosine-Protein Phosphatase, Non-Receptor Type 1 Chain: A Fragment: Catalytic Domain Synonym: Protein-Tyrosine Phosphatase 1b, Ptp-1b Ec: 3.1.3.48 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ptpn1, Ptp1b Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid
symmetry	Space Group: P 31 2 1	R_factor 0.183 R_Free 0.203
crystal cell	length a length b length c angle alpha angle beta angle gamma 88.330 88.330 104.180 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	CL, MG	enzyme	Hydrolase E.C.3.1.3.48 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Residues distant from the active site influence protein-tyrosine phosphatase 1B inhibitor binding., Montalibet J, Skorey K, McKay D, Scapin G, Asante-Appiah E, Kennedy BP, J Biol Chem. 2006 Feb 24;281(8):5258-66. Epub 2005 Dec 6. PMID:16332678

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk] Biological Unit Coordinates (2f6f.pdb1.gz) 55 Kb LPC: Ligand-Protein Contacts for 2F6F CSU: Contacts of Structural Units for 2F6F Likely Quarternary Molecular Structure file(s) for 2F6F Structure Factors (250 Kb) Retrieve 2F6F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2F6F from S2C, [Save to disk] Re-refined 2f6f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2F6F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2F6F

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2F6F, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2f6f_A] [2f6f] SWISS-PROT database: [P18031] Domain organization of [PTN1_HUMAN] by SWISSPFAM Domains found in 2F6F: [PTPc] [PTPc_DSPc ] by SMART

Other resources with information on 2F6F

Community annotation for 2F6F at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---