2F76 Viral Protein date Nov 30, 2005
title Solution Structure Of The M-Pmv Wild Type Matrix Protein (P1
authors J.Vlach, J.Lipov, V.Veverka, J.Lang, P.Srb, M.Rumlova, E.Hunter, T. R.Hrabal
compound source
Molecule: Core Protein P10
Chain: X
Fragment: Residues 1-100 Of Gag Polyprotein
Synonym: M-Pmv Matrix Protein
Engineered: Yes
Other_details: A Part Of Core Polyprotein Which Contains: C Protein P10; Core Phosphoprotein Pp18; Core Protein P12; Co P27; Core Protein P14; Core Protein P4
Organism_scientific: Simian Retrovirus 1
Organism_taxid: 11942
Gene: Gag
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceD-retrovirus morphogenetic switch driven by the targeting signal accessibility to Tctex-1 of dynein., Vlach J, Lipov J, Rumlova M, Veverka V, Lang J, Srb P, Knejzlik Z, Pichova I, Hunter E, Hrabal R, Ruml T, Proc Natl Acad Sci U S A. 2008 Jul 29;105(30):10565-70. Epub 2008 Jul 22. PMID:18647839
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (566 Kb) [Save to disk]
  • Biological Unit Coordinates (2f76.pdb1.gz) 28 Kb
  • CSU: Contacts of Structural Units for 2F76
  • Original NMR restraints for 2F76 from PDB
  • Retrieve 2F76 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2F76 from S2C, [Save to disk]
  • View 2F76 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2F76
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2F76, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2f76] [2f76_X]
  • SWISS-PROT database: [P04022]
  • Domain organization of [GAG_SRV1] by SWISSPFAM
  • Other resources with information on 2F76
  • Community annotation for 2F76 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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