2F7E	Transferase	date	Nov 30, 2005
title	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Pyridin-3-Yloxymethyl-Etylamine
authors	V.S.Stoll
compound		source
Molecule: Camp-Dependent Protein Kinase, Alpha-Catalytic Su Chain: E Synonym: Pka C-Alpha Ec: 2.7.1.37 Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913 Gene: Prkaca Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Pki Inhibitory Peptide Chain: I Engineered: Yes		Synthetic: Yes
symmetry	Space Group: P 21 21 21	R_factor 0.283 R_Free 0.323
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.812 75.016 80.028 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	2EA BindingDB	enzyme	Transferase E.C.2.7.1.37 BRENDA
Gene Ontology	Chain Function Process Component E I
Primary reference	Synthesis and structure-activity relationship of 3,4'-bispyridinylethylenes: discovery of a potent 3-isoquinolinylpyridine inhibitor of protein kinase B (PKB/Akt) for the treatment of cancer., Li Q, Woods KW, Thomas S, Zhu GD, Packard G, Fisher J, Li T, Gong J, Dinges J, Song X, Abrams J, Luo Y, Johnson EF, Shi Y, Liu X, Klinghofer V, Des Jong R, Oltersdorf T, Stoll VS, Jakob CG, Rosenberg SH, Giranda VL, Bioorg Med Chem Lett. 2006 Apr 1;16(7):2000-7. Epub 2006 Jan 18. PMID:16413780

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (2f7e.pdb1.gz) 62 Kb LPC: Ligand-Protein Contacts for 2F7E CSU: Contacts of Structural Units for 2F7E Likely Quarternary Molecular Structure file(s) for 2F7E Retrieve 2F7E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2F7E from S2C, [Save to disk]

View 2F7E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2F7E

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2F7E, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2f7e_I] [2f7e_E] [2f7e] SWISS-PROT database: [P61925] [P00517] Domain organization of [IPKA_HUMAN] [KAPCA_BOVIN] by SWISSPFAM Domains found in 2F7E: [S_TK_X] [S_TKc ] by SMART

Other resources with information on 2F7E

Community annotation for 2F7E at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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