2F7M	Transferase	date	Dec 01, 2005
title	Crystal Structure Of Unliganded Human Fpps
authors	J.M.Rondeau, F.Bitsch, E.Bourgier, M.Geiser, R.Hemmig, M.Kroemer S.Lehmann, P.Ramage, S.Rieffel, A.Strauss, J.R.Green, W.Jahnke
compound		source
Molecule: Farnesyl Diphosphate Synthase Chain: F Fragment: Residues 6-353 Synonym: Fpp Synthetase; Fps; Farnesyl Pyrophosphate Synthe Ec: 2.5.1.1, 2.5.1.10 Engineered: Yes Other_details: Includes: Dimethylallyltranstransferase Geranyltranstransferase		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Fdps, Fps, Kiaa1293 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 Tuner(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28
symmetry	Space Group: P 41 21 2	R_factor 0.225 R_Free 0.257
crystal cell	length a length b length c angle alpha angle beta angle gamma 110.889 110.889 76.996 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	PO4	enzyme	Transferase E.C.2.5.1.1 BRENDA
Gene Ontology	Chain Function Process Component F
Primary reference	Structural basis for the exceptional in vivo efficacy of bisphosphonate drugs., Rondeau JM, Bitsch F, Bourgier E, Geiser M, Hemmig R, Kroemer M, Lehmann S, Ramage P, Rieffel S, Strauss A, Green JR, Jahnke W, ChemMedChem. 2006 Feb;1(2):267-73. PMID:16892359

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk] Biological Unit Coordinates (2f7m.pdb1.gz) 112 Kb LPC: Ligand-Protein Contacts for 2F7M CSU: Contacts of Structural Units for 2F7M Likely Quarternary Molecular Structure file(s) for 2F7M Structure Factors (201 Kb) Retrieve 2F7M in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2F7M from S2C, [Save to disk] Re-refined 2f7m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2F7M in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2F7M

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2F7M, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2f7m] [2f7m_F] SWISS-PROT database: [P14324] Domain organization of [FPPS_HUMAN] by SWISSPFAM

Other resources with information on 2F7M

Community annotation for 2F7M at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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