2F8L Crystal structure of a putative class i s-adenosylmethionine-dependent methyltransferase (lmo1582) from listeria monocytogenes at 2.20 A resolution date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.211
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.20
ligand CL, GOL, MSE, SAM, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (2f8l.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 2F8L
  • CSU: Contacts of Structural Units for 2F8L
  • Likely Quarternary Molecular Structure file(s) for 2F8L
  • Structure Factors (3926 Kb)
  • Retrieve 2F8L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2F8L from S2C, [Save to disk]
  • Re-refined 2f8l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2F8L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2F8L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2F8L, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2f8l] [2f8l_A]
  • SWISS-PROT database: [Q8Y6U9]
  • Domain organization of [Q8Y6U9_LISMO] by SWISSPFAM
  • Other resources with information on 2F8L
  • Community annotation for 2F8L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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