2FEO Signaling Protein,Transferase date Dec 16, 2005
title Mutant R188m Of The Cytidine Monophosphate Kinase From E. Co Complexed With Dcmp
authors A.Ofiteru, N.Bucurenci, E.Alexov, T.Bertrand, P.Briozzo, H.Munier L.Tourneux, O.Barzu, A.M.Gilles
compound source
Molecule: Cytidylate Kinase
Chain: A
Synonym: Cytidine Monophosphate Kinase; Ck; Cmp Kinase; Pro P25;
Ec: 2.7.4.14
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Cmk, Mssa
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Cj236
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Phs210
Other_details: Used Helper Phage M13k07 To Perform The Sing Mutation
symmetry Space Group: P 41 21 2
R_factor 0.259 R_Free 0.339
crystal
cell
length a length b length c angle alpha angle beta angle gamma
72.949 72.949 76.960 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
ligand DC, SO4 enzyme Transferase E.C.2.7.4.14 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • cytidylate kinase activity


  • Primary referenceStructural and functional consequences of single amino acid substitutions in the pyrimidine base binding pocket of Escherichia coli CMP kinase., Ofiteru A, Bucurenci N, Alexov E, Bertrand T, Briozzo P, Munier-Lehmann H, Gilles AM, FEBS J. 2007 Jul;274(13):3363-73. Epub 2007 Jun 3. PMID:17542990
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (2feo.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 2FEO
  • CSU: Contacts of Structural Units for 2FEO
  • Likely Quarternary Molecular Structure file(s) for 2FEO
  • Structure Factors (46 Kb)
  • Retrieve 2FEO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FEO from S2C, [Save to disk]
  • Re-refined 2feo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FEO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FEO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FEO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2feo] [2feo_A]
  • SWISS-PROT database: [P0A6I0]
  • Domain organization of [KCY_ECOLI] by SWISSPFAM
  • Other resources with information on 2FEO
  • Community annotation for 2FEO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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