2FHL Sugar Binding Protein date Dec 26, 2005
title Avidin Related Protein (Avr4)-Bna Complex
authors O.Livnah, M.Prizant
compound source
Molecule: Avidin-Related Protein 45
Chain: A, B
Engineered: Yes
Mutation: Yes
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Gene: Avr4
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 41 21 2
R_factor 0.167 R_Free 0.177
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.039 78.039 110.028 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.05 Å
ligand BNI, FMT enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceFactors dictating the pseudocatalytic efficiency of avidins., Prizant M, Eisenberg-Domovich Y, Hytonen VP, Kulomaa MS, Wilchek M, Bayer EA, Livnah O, J Mol Biol. 2006 May 5;358(3):754-63. Epub 2006 Mar 3. PMID:16546211
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (2fhl.pdb1.gz) 179 Kb
  • LPC: Ligand-Protein Contacts for 2FHL
  • CSU: Contacts of Structural Units for 2FHL
  • Likely Quarternary Molecular Structure file(s) for 2FHL
  • Retrieve 2FHL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FHL from S2C, [Save to disk]
    • View 2FHL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FHL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FHL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fhl_B] [2fhl] [2fhl_A]
  • SWISS-PROT database: [P56734]
  • Domain organization of [AVR4_CHICK] by SWISSPFAM
    • Other resources with information on 2FHL
  • Community annotation for 2FHL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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