2FHO Rna Binding Protein date Dec 26, 2005
title Nmr Solution Structure Of The Human Spliceosomal Protein Com Sf3b155
authors K.Kuwasako, N.Dohmae, M.Inoue, M.Shirouzu, P.Guntert, B.Seraphin, S.Yokoyama, Riken Structural Genomicsproteomics Initiative
compound source
Molecule: Spliceosomal Protein Sf3b155
Chain: A
Fragment: Residues In Database 379-424
Synonym: Spliceosomal Protein Sf3b155, Spliceosome Associat 155, Sap 155, Sf3b155, Pre-Mrna Splicing Factor Sf3b 155 Kd
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sf3b155
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex6p-1-Sf3b155(379-424)-His6-P

Molecule: Spliceosomal Protein P14
Chain: B
Fragment: Rna Recognition Motif
Synonym: Spliceosomal Protein P14, Sf3b 14 Kda Subunit
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: P14
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex6p-1-Sf3b155(379-424)-His6-P
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (783 Kb) [Save to disk]
  • Biological Unit Coordinates (2fho.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 2FHO
  • Original NMR restraints for 2FHO from PDB
  • Retrieve 2FHO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FHO from S2C, [Save to disk]
    • View 2FHO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FHO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FHO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fho_A] [2fho] [2fho_B]
  • SWISS-PROT database: [Q9Y3B4] [O75533]
  • Domain organization of [PM14_HUMAN] [SF3B1_HUMAN] by SWISSPFAM
  • Domain found in 2FHO: [RRM ] by SMART
    • Other resources with information on 2FHO
  • Community annotation for 2FHO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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