2FJU Signaling Protein,Apoptosis Hydrolase date Jan 03, 2006
title Activated Rac1 Bound To Its Effector Phospholipase C Beta 2
authors M.R.Jezyk, J.T.Snyder, T.K.Harden, J.Sondek
compound source
Molecule: Ras-Related C3 Botulinum Toxin Substrate 1
Chain: A
Fragment: Residues 1-189
Synonym: P21-Rac1; Ras-Like Protein Tc25
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Rac1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid

Molecule: 1-Phosphatidylinositol-4,5-Bisphosphate Phosphodi Beta 2;
Chain: B
Fragment: Residues 1-799
Synonym: Phosphoinositide Phospholipase C; Phospholipase C- Plc-Beta-2;
Ec: 3.1.4.11
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Plcb2
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf21
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pvl1392
symmetry Space Group: P 32 2 1
R_factor 0.208 R_Free 0.226
crystal
cell
length a length b length c angle alpha angle beta angle gamma
185.822 185.822 93.823 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.20 Å
ligand CA, GSP, MG enzyme Hydrolase E.C.3.1.4.11 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceCrystal structure of Rac1 bound to its effector phospholipase C-beta2., Jezyk MR, Snyder JT, Gershberg S, Worthylake DK, Harden TK, Sondek J, Nat Struct Mol Biol. 2006 Dec;13(12):1135-40. Epub 2006 Nov 19. PMID:17115053
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (156 Kb) [Save to disk]
  • Biological Unit Coordinates (2fju.pdb1.gz) 150 Kb
  • LPC: Ligand-Protein Contacts for 2FJU
  • CSU: Contacts of Structural Units for 2FJU
  • Likely Quarternary Molecular Structure file(s) for 2FJU
  • Structure Factors (747 Kb)
  • Retrieve 2FJU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FJU from S2C, [Save to disk]
  • Re-refined 2fju structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FJU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FJU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FJU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fju_B] [2fju] [2fju_A]
  • SWISS-PROT database: [Q00722] [P63000]
  • Domain organization of [PLCB2_HUMAN] [RAC1_HUMAN] by SWISSPFAM
  • Domains found in 2FJU: [C2] [PLCXc] [PLCYc] [RHO ] by SMART
  • Other resources with information on 2FJU
  • Community annotation for 2FJU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science