2FKC Crystal Form I of Pre-Reactive Complex of Restriction Endonuclease HinP1I with Cognate DNA and Calcium Ion date
authors Horton, J.R.
compound source
symmetry
R_factor
R_Free 0.26
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.39
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • endonuclease activity


    • Primary referenceDNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion., Horton JR, Zhang X, Maunus R, Yang Z, Wilson GG, Roberts RJ, Cheng X, Nucleic Acids Res. 2006 Feb 9;34(3):939-48. Print 2006. PMID:16473850
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (2fkc.pdb1.gz) 50 Kb
  • Biological Unit Coordinates (2fkc.pdb2.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 2FKC
  • CSU: Contacts of Structural Units for 2FKC
  • Likely Quarternary Molecular Structure file(s) for 2FKC
  • Retrieve 2FKC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FKC from S2C, [Save to disk]
    • View 2FKC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FKC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FKC, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fkc_E] [2fkc] [2fkc_A] [2fkc_B] [2fkc_F] [2fkc_C] [2fkc_D]
  • SWISS-PROT database: [Q5I6E6]
  • Domain organization of [Q5I6E6_HAEIN] by SWISSPFAM
    • Other resources with information on 2FKC
  • Community annotation for 2FKC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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