2FKE Cis-Trans Isomerase date Jan 27, 1993
title Fk-506-Binding Protein: Three-Dimensional Structure Of The C With The Antagonist L-685,818
authors J.W.Becker, B.M.Mckeever, J.Rotonda
compound source
Molecule: Fk506 Binding Protein
Chain: A
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 42 21 2
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.154 58.154 55.445 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.72 Å
ligand FK5 BindingDB enzyme
related structures by homologous chain: 1FKD, 1FKL
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFK-506-binding protein: three-dimensional structure of the complex with the antagonist L-685,818., Becker JW, Rotonda J, McKeever BM, Chan HK, Marcy AI, Wiederrecht G, Hermes JD, Springer JP, J Biol Chem 1993 May 25;268(15):11335-9. PMID:7684380
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (2fke.pdb1.gz) 38 Kb
  • Biological Unit Coordinates (2fke.pdb2.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 2FKE
  • CSU: Contacts of Structural Units for 2FKE
  • Likely Quarternary Molecular Structure file(s) for 2FKE
  • Structure Factors (122 Kb)
  • Retrieve 2FKE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FKE from S2C, [Save to disk]
  • Re-refined 2fke structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2FKE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FKE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FKE, from MSDmotif at EBI
  • Genome occurence of 2FKE's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2fke__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fke] [2fke_A]
  • SWISS-PROT database: [P62942]
  • Belongs to the immunophilin-like prolyl:peptidyl isomerase regulator (i-ppi) family according to TCDB.
  • Domain organization of [FKB1A_HUMAN] by SWISSPFAM
    • Other resources with information on 2FKE
  • Community annotation for 2FKE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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