2FL2 Cell Cycle date Jan 05, 2006
title Crystal Structure Of Ksp In Complex With Inhibitor 19
authors Y.Yan
compound source
Molecule: Kinesin-Like Protein Kif11
Chain: A, B
Fragment: Kinesin-Motor Domain, Residues 1-368
Synonym: Kinesin-Related Motor Protein Eg5, Kinesin-Like Sp Protein Hksp, Thyroid Receptor Interacting Protein 5, Trip5 Like Protein 1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kif11, Eg5, Knsl1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Prseta
symmetry Space Group: P 21 21 21
R_factor 0.257 R_Free 0.316
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.800 79.500 159.000 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand ADP, MG, N4T BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceKinesin spindle protein (KSP) inhibitors. Part 2: The design, synthesis, and characterization of 2,4-diaryl-2,5-dihydropyrrole inhibitors of the mitotic kinesin KSP., Fraley ME, Garbaccio RM, Arrington KL, Hoffman WF, Tasber ES, Coleman PJ, Buser CA, Walsh ES, Hamilton K, Fernandes C, Schaber MD, Lobell RB, Tao W, South VJ, Yan Y, Kuo LC, Prueksaritanont T, Shu C, Torrent M, Heimbrook DC, Kohl NE, Huber HE, Hartman GD, Bioorg Med Chem Lett. 2006 Jan 23;. PMID:16439123
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (2fl2.pdb1.gz) 56 Kb
  • Biological Unit Coordinates (2fl2.pdb2.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 2FL2
  • CSU: Contacts of Structural Units for 2FL2
  • Likely Quarternary Molecular Structure file(s) for 2FL2
  • Retrieve 2FL2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FL2 from S2C, [Save to disk]
  • View 2FL2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FL2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FL2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fl2_A] [2fl2] [2fl2_B]
  • SWISS-PROT database: [P52732]
  • Domain organization of [KIF11_HUMAN] by SWISSPFAM
  • Domain found in 2FL2: [KISc ] by SMART
  • Other resources with information on 2FL2
  • Community annotation for 2FL2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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