2FMZ Lyase date Jan 10, 2006
title Carbonic Anhydrase Activators. Activation Of Isoforms I, II, Vii And Xiv With L- And D- Phenylalanine, Structure With D- Phenylalanine.
authors C.Temperini, A.Scozzafava, D.Vullo, C.T.Supuran
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonic Anhydrase II, Carbonate Dehydratase II, C Carbonic Anhydrase C;
Ec: 4.2.1.1
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor 0.218 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.090 41.380 72.100 90.00 104.40 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand DPN, HG, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCarbonic anhydrase activators. activation of isoforms I, II, IV, VA, VII, and XIV with L- and D-phenylalanine and crystallographic analysis of their adducts with isozyme II: stereospecific recognition within the active site of an enzyme and its consequences for the drug design., Temperini C, Scozzafava A, Vullo D, Supuran CT, J Med Chem. 2006 May 18;49(10):3019-27. PMID:16686544
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (2fmz.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 2FMZ
  • CSU: Contacts of Structural Units for 2FMZ
  • Likely Quarternary Molecular Structure file(s) for 2FMZ
  • Structure Factors (341 Kb)
  • Retrieve 2FMZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FMZ from S2C, [Save to disk]
  • Re-refined 2fmz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FMZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FMZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FMZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fmz_A] [2fmz]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 2FMZ: [Carb_anhydrase ] by SMART
  • Other resources with information on 2FMZ
  • Community annotation for 2FMZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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