2FN5 Signaling Protein date Jan 10, 2006
title Nmr Structure Of The Neurabin Pdz Domain (502-594)
authors B.Dancheck, W.Peti
compound source
Molecule: Neurabin-1
Chain: A
Fragment: Pdz Domain
Synonym: Neurabin-I, Neural Tissue-Specific F-Actin Binding I, Protein Phosphatase 1 Regulatory Subunit 9a, P180, Pp1bp
Engineered: Yes
 Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Gene: Ppp1r9a
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_cell_line: Irl
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Rp1b
methodSolution NMR
Primary referenceStructural basis for spinophilin-neurabin receptor interaction., Kelker MS, Dancheck B, Ju T, Kessler RP, Hudak J, Nairn AC, Peti W, Biochemistry. 2007 Mar 6;46(9):2333-44. Epub 2007 Feb 6. PMID:17279777
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (454 Kb) [Save to disk]
  • Biological Unit Coordinates (2fn5.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 2FN5
  • Original NMR restraints for 2FN5 from PDB
  • Retrieve 2FN5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FN5 from S2C, [Save to disk]
    • View 2FN5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2FN5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FN5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fn5_A] [2fn5]
  • SWISS-PROT database: [O35867]
  • Domain organization of [NEB1_RAT] by SWISSPFAM
  • Domain found in 2FN5: [PDZ ] by SMART
    • Other resources with information on 2FN5
  • Community annotation for 2FN5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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