2FNO Crystal structure of a glutathione s-transferase (atu5508) from agrobacterium tumefaciens str. c58 at 2.00 A resolution date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.00
ligand MSE, SCN enzyme
note 2FNO is a representative structure and supersedes 1ZGM
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceComparative structural analysis of a novel glutathioneS-transferase (ATU5508) from Agrobacterium tumefaciens at 2.0 A resolution., Kosloff M, Han GW, Krishna SS, Schwarzenbacher R, Fasnacht M, Elsliger MA, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod HL, Canaves JM, Carlton D, Chiu HJ, Clayton T, DiDonato M, Duan L, Feuerhelm J, Grittini C, Grzechnik SK, Hale J, Hampton E, Haugen J, Jaroszewski L, Jin KK, Johnson H, Klock HE, Knuth MW, Koesema E, Kreusch A, Kuhn P, Levin I, McMullan D, Miller MD, Morse AT, Moy K, Nigoghossian E, Okach L, Oommachen S, Page R, Paulsen J, Quijano K, Reyes R, Rife CL, Sims E, Spraggon G, Sridhar V, Stevens RC, van den Bedem H, Velasquez J, White A, Wolf G, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA, Proteins. 2006 Nov 15;65(3):527-37. PMID:16988933
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (87 Kb) [Save to disk]
  • Biological Unit Coordinates (2fno.pdb1.gz) 82 Kb
  • Biological Unit Coordinates (2fno.pdb2.gz) 40 Kb
  • Biological Unit Coordinates (2fno.pdb3.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 2FNO
  • CSU: Contacts of Structural Units for 2FNO
  • Likely Quarternary Molecular Structure file(s) for 2FNO
  • Structure Factors (4133 Kb)
  • Retrieve 2FNO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FNO from S2C, [Save to disk]
  • Re-refined 2fno structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FNO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FNO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FNO, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2fno_B] [2fno] [2fno_A]
  • SWISS-PROT database: [Q7D2W7]
  • Domain organization of [Q7D2W7_AGRT5] by SWISSPFAM
  • Other resources with information on 2FNO
  • Community annotation for 2FNO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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