2FOI Oxidoreductase date Jan 13, 2006
title Synthesis, Biological Activity, And X-Ray Crystal Structural Of Diaryl Ether Inhibitors Of Malarial Enoyl Acp Reductase.
authors J.S.Freundlich, H.Shieh, J.W.Anderson, M.Kuo, M.Yu, J.Valderramos L.Karagyozov, H.Tsai, E.Lucumi, W.R.Jacobs Jr., G.A.Schiehser, D.P.Jacobus, D.A.Fidock, J.C.Sacchettini
compound source
Molecule: Enoyl-Acyl Carrier Reductase
Chain: A, B
Fragment: N-Terminal Fragment, Residues 97-216
Ec: 1.3.1.9
Engineered: Yes
Organism_scientific: Plasmodium Falciparum
Organism_taxid: 36329
Strain: 3d7
Gene: Pfenr
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Codon+-Ril Cells
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a

Molecule: Enoyl-Acyl Carrier Reductase
Chain: C, D
Fragment: C-Terminal Fragment, Residues 97-156
Ec: 1.3.1.9
Engineered: Yes

Organism_scientific: Plasmodium Falciparum
Organism_taxid: 36329
Strain: 3d7
Gene: Pfenr
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3) Codon+-Ril Cells
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 43 21 2
R_factor 0.193 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
130.861 130.861 82.687 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand JPA, NAD BindingDB enzyme Oxidoreductase E.C.1.3.1.9 BRENDA
Primary referenceX-ray structural analysis of plasmodium falciparum enoyl acyl carrier protein reductase as a pathway towards the optimization of triclosan antimalarial efficacy., Freundlich JS, Wang F, Tsai HC, Kuo M, Shieh HM, Anderson JW, Nkrumah LJ, Valderramos JC, Yu M, Kumar TR, Valderramos SG, Jacobs WR Jr, Schiehser GA, Jacobus DP, Fidock DA, Sacchettini JC, J Biol Chem. 2007 Jun 13;. PMID:17567585
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (2foi.pdb1.gz) 96 Kb
  • Biological Unit Coordinates (2foi.pdb2.gz) 190 Kb
  • LPC: Ligand-Protein Contacts for 2FOI
  • CSU: Contacts of Structural Units for 2FOI
  • Likely Quarternary Molecular Structure file(s) for 2FOI
  • Structure Factors (196 Kb)
  • Retrieve 2FOI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2FOI from S2C, [Save to disk]
  • Re-refined 2foi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2FOI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2FOI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2FOI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2foi_A] [2foi_D] [2foi_B] [2foi_C] [2foi]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2FOI
  • Community annotation for 2FOI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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