2FUN	Apoptosis Hydrolase	date	Jan 27, 2006
title	Alternative P35-Caspase-8 Complex
authors	M.Lu, T.Min, D.Eliezer, H.Wu
compound		source
Molecule: Early 35 Kda Protein Chain: A, C Synonym: P35, Apoptosis Preventing Protein Engineered: Yes		Organism_scientific: Autographa Californica Nucleopolyhedro Organism_taxid: 46015 Gene: P35 Expression_system: Escherichia Coli Expression_system_taxid: 562
Molecule: Caspase-8 Chain: B, D Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 2 2 21	R_factor 0.229 R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma 99.970 117.340 346.450 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
Gene Ontology	Chain Function Process Component A, C cysteine-type endopeptidase ... D, B
Primary reference	Native chemical ligation in covalent caspase inhibition by p35., Lu M, Min T, Eliezer D, Wu H, Chem Biol. 2006 Feb;13(2):117-22. PMID:16492559

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (181 Kb) [Save to disk] Biological Unit Coordinates (2fun.pdb1.gz) 90 Kb Biological Unit Coordinates (2fun.pdb2.gz) 90 Kb CSU: Contacts of Structural Units for 2FUN Likely Quarternary Molecular Structure file(s) for 2FUN Retrieve 2FUN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2FUN from S2C, [Save to disk]

View 2FUN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2FUN

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2FUN, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2fun_C] [2fun] [2fun_B] [2fun_A] [2fun_D] SWISS-PROT database: [Q14790] [P08160] Domain organization of [CASP8_HUMAN] [VP35_NPVAC] by SWISSPFAM Domain found in 2FUN: [CASc ] by SMART

Other resources with information on 2FUN

Community annotation for 2FUN at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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