2FWN	Lyase	date	Feb 02, 2006
title	Phosphorylation Of An Active Site Serine In A Thdp-Dependent Phosphonate Inactivation
authors	A.K.Bera, M.S.Hasson
compound		source
Molecule: Benzoylformate Decarboxylase Chain: A Synonym: Bfd, Bfdc Ec: 4.1.1.7 Engineered: Yes		Organism_scientific: Pseudomonas Putida Organism_taxid: 303 Gene: Mdlc Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Jm105 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pkk233-2
symmetry	Space Group: I 2 2 2	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 81.165 95.039 137.363 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.40 Å
ligand	CA, MG, SEP, TDP, TPP	enzyme	Lyase E.C.4.1.1.7 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Mechanism-based inactivation of benzoylformate decarboxylase, a thiamin diphosphate-dependent enzyme., Bera AK, Polovnikova LS, Roestamadji J, Widlanski TS, Kenyon GL, McLeish MJ, Hasson MS, J Am Chem Soc. 2007 Apr 11;129(14):4120-1. Epub 2007 Mar 17. PMID:17367138

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk] Biological Unit Coordinates (2fwn.pdb1.gz) 363 Kb LPC: Ligand-Protein Contacts for 2FWN CSU: Contacts of Structural Units for 2FWN Likely Quarternary Molecular Structure file(s) for 2FWN Structure Factors (1057 Kb) Retrieve 2FWN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2FWN from S2C, [Save to disk] Re-refined 2fwn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2FWN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2FWN

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2FWN, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2fwn_A] [2fwn] SWISS-PROT database: [P20906] Domain organization of [MDLC_PSEPU] by SWISSPFAM

Other resources with information on 2FWN

Community annotation for 2FWN at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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