2G3B Transcription date Feb 17, 2006
title Crystal Structure Of Putative Tetr-Family Transcriptional Re From Rhodococcus Sp.
authors M.Chruszcz, E.Evdokimova, M.Cymborowski, O.Kagan, S.Wang, K.D.Koc A.Savchenko, A.Edwards, A.Joachimiak, W.Minor, Midwest Center F Structural Genomics (Mcsg)
compound source
Molecule: Putative Tetr-Family Transcriptional Regulator
Chain: A, B
Engineered: Yes
 Organism_scientific: Rhodococcus Sp.
Organism_taxid: 101510
Strain: Rha1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 Gold (De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 21 21 21
R_factor 0.185 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.890 75.320 100.248 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand GOL, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (2g3b.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 2G3B
  • CSU: Contacts of Structural Units for 2G3B
  • Likely Quarternary Molecular Structure file(s) for 2G3B
  • Structure Factors (404 Kb)
  • Retrieve 2G3B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2G3B from S2C, [Save to disk]
  • Re-refined 2g3b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2G3B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2G3B
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2G3B, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2g3b] [2g3b_B] [2g3b_A]
  • SWISS-PROT database: [Q0S8G3]
  • Domain organization of [Q0S8G3_RHOSR] by SWISSPFAM
    • Other resources with information on 2G3B
  • Community annotation for 2G3B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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