2G4R Biosynthetic Protein date Feb 22, 2006
title Anomalous Substructure Of Moga
authors C.Mueller-Dieckmann, M.S.Weiss
compound source
Molecule: Molybdopterin Biosynthesis Mog Protein
Chain: A, B, C
Synonym: Moga
Engineered: Yes
 Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Mog
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.179 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
31.590 97.840 57.710 90.00 105.02 90.00
method X-Ray Diffractionresolution 1.92 Å
ligand CL, TRS enzyme
Primary referenceOn the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths., Mueller-Dieckmann C, Panjikar S, Schmidt A, Mueller S, Kuper J, Geerlof A, Wilmanns M, Singh RK, Tucker PA, Weiss MS, Acta Crystallogr D Biol Crystallogr. 2007 Mar;63(Pt 3):366-80. Epub 2007, Feb 21. PMID:17327674
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (2g4r.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 2G4R
  • CSU: Contacts of Structural Units for 2G4R
  • Likely Quarternary Molecular Structure file(s) for 2G4R
  • Structure Factors (282 Kb)
  • Retrieve 2G4R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2G4R from S2C, [Save to disk]
  • Re-refined 2g4r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2G4R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2G4R
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2G4R, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2g4r_B] [2g4r] [2g4r_A] [2g4r_C]
  • SWISS-PROT database: [O53877]
  • Domain organization of [O53877_MYCTU] by SWISSPFAM
  • Domain found in 2G4R: [MoCF_biosynth ] by SMART
    • Other resources with information on 2G4R
  • Community annotation for 2G4R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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