2G5N Hydrolase date Feb 23, 2006
title Indole-Amidine Complexes With Bovine Trypsin
authors A.D.Kline, S.L.Briggs, S.Subramaniam
compound source
Molecule: Cationic Trypsin
Chain: A
Synonym: Beta-Trypsin
Ec: 3.4.21.4
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Pancreas
symmetry Space Group: P 31 2 1
R_factor 0.187 R_Free 0.204
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.340 54.340 107.656 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.51 Å
ligand 23M, CA, SO4 enzyme Hydrolase E.C.3.4.21.4 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (2g5n.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 2G5N
  • CSU: Contacts of Structural Units for 2G5N
  • Likely Quarternary Molecular Structure file(s) for 2G5N
  • Structure Factors (467 Kb)
  • Retrieve 2G5N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2G5N from S2C, [Save to disk]
  • Re-refined 2g5n structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2G5N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2G5N
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2G5N, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2g5n_A] [2g5n]
  • SWISS-PROT database: [P00760]
  • Domain organization of [TRY1_BOVIN] by SWISSPFAM
  • Domain found in 2G5N: [Tryp_SPc ] by SMART
  • Other resources with information on 2G5N
  • Community annotation for 2G5N at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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