2G6Y	Luminescent Protein	date	Feb 26, 2006
title	Crystal Structure Of The Novel Green Fluorescent Protein Fro Copepod Pontellina Plumata
authors	A.G.Evdokimov, M.E.Pokross, D.M.Chudakov
compound		source
Molecule: Green Fluorescent Protein 2 Chain: A, B, C, D Engineered: Yes Mutation: Yes		Organism_scientific: Pontellina Plumata Organism_taxid: 239963 Gene: Pplugfp2 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Xl1-Blue Expression_system_vector_type: Plasmid Expression_system_plasmid: Pqe30
symmetry	Space Group: P 1 21 1	R_factor 0.162 R_Free 0.218
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.007 97.160 75.153 90.00 96.46 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	CR2	enzyme
note	2G6Y is a representative structure
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structural basis for the fast maturation of Arthropoda green fluorescent protein., Evdokimov AG, Pokross ME, Egorov NS, Zaraisky AG, Yampolsky IV, Merzlyak EM, Shkoporov AN, Sander I, Lukyanov KA, Chudakov DM, EMBO Rep. 2006 Aug 25;. PMID:16936637

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (329 Kb) [Save to disk] Biological Unit Coordinates (2g6y.pdb1.gz) 315 Kb LPC: Ligand-Protein Contacts for 2G6Y CSU: Contacts of Structural Units for 2G6Y Likely Quarternary Molecular Structure file(s) for 2G6Y Structure Factors (887 Kb) Retrieve 2G6Y in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2G6Y from S2C, [Save to disk] Re-refined 2g6y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2G6Y in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2G6Y

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2G6Y, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2g6y_C] [2g6y_A] [2g6y] [2g6y_D] [2g6y_B] SWISS-PROT database: [Q6WV12] Domain organization of [Q6WV12_9MAXI] by SWISSPFAM

Other resources with information on 2G6Y

Community annotation for 2G6Y at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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