2G7G Transcription date Feb 28, 2006
title The Crystal Structure Of The Putative Transcriptional Regula Rha04620 From Rhodococcus Sp. Rha1
authors Y.Kim, A.Joachimiak, E.Evdokimova, O.Kagan, A.Savchenko, A.M.Edwa Midwest Center For Structural Genomics (Mcsg)
compound source
Molecule: Rha04620, Putative Transcriptional Regulator
Chain: A
Fragment: Rha04620
Engineered: Yes
Organism_scientific: Rhodococcus Sp.
Organism_taxid: 101510
Strain: Rha1
Gene: Rha04620
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21de3
Expression_system_vector_type: Plasmid
symmetry Space Group: P 41 21 2
R_factor 0.191 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.508 99.508 40.472 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.01 Å
ligand ACY, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (40 Kb) [Save to disk]
  • Biological Unit Coordinates (2g7g.pdb1.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 2G7G
  • CSU: Contacts of Structural Units for 2G7G
  • Likely Quarternary Molecular Structure file(s) for 2G7G
  • Structure Factors (262 Kb)
  • Retrieve 2G7G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2G7G from S2C, [Save to disk]
  • Re-refined 2g7g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2G7G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2G7G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2G7G, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2g7g] [2g7g_A]
  • SWISS-PROT database: [Q0S9X7]
  • Domain organization of [Q0S9X7_RHOSR] by SWISSPFAM
  • Other resources with information on 2G7G
  • Community annotation for 2G7G at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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