2GA2	Hydrolase	date	Mar 07, 2006
title	H-Metap2 Complexed With A193400
authors	C.Park
compound		source
Molecule: Methionine Aminopeptidase 2 Chain: A Synonym: Metap 2, Peptidase M 2, Initiation Factor 2- Associated 67 Kda Glycoprotein, P67, P67eif2; Ec: 3.4.11.18 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Metap2, Mnpep, P67eif2 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: C 2 2 21	R_factor 0.202 R_Free 0.251
crystal cell	length a length b length c angle alpha angle beta angle gamma 89.731 98.793 101.213 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.95 Å
ligand	A19, MN BindingDB	enzyme	Hydrolase E.C.3.4.11.18 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Development of sulfonamide compounds as potent methionine aminopeptidase type II inhibitors with antiproliferative properties., Kawai M, BaMaung NY, Fidanze SD, Erickson SA, Tedrow JS, Sanders WJ, Vasudevan A, Park C, Hutchins C, Comess KM, Kalvin D, Wang J, Zhang Q, Lou P, Tucker-Garcia L, Bouska J, Bell RL, Lesniewski R, Henkin J, Sheppard GS, Bioorg Med Chem Lett. 2006 Jul 1;16(13):3574-7. Epub 2006 May 2. PMID:16632353

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk] Biological Unit Coordinates (2ga2.pdb1.gz) 66 Kb LPC: Ligand-Protein Contacts for 2GA2 CSU: Contacts of Structural Units for 2GA2 Likely Quarternary Molecular Structure file(s) for 2GA2 Retrieve 2GA2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GA2 from S2C, [Save to disk]

View 2GA2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GA2

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GA2, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1j2ga2, region A:159-312 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ga2_A] [2ga2] SWISS-PROT database: [P50579] Domain organization of [AMPM2_HUMAN] by SWISSPFAM

Other resources with information on 2GA2

Community annotation for 2GA2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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