2GE9 Transferase date Mar 18, 2006
title Solution Structures Of The Sh2 Domain Of Bruton'S Tyrosine K
authors J.W.Cheng, K.C.Huang
compound source
Molecule: Tyrosine-Protein Kinase Btk
Chain: A
Fragment: Sh2 Domain
Synonym: Bruton'S Tyrosine Kinase, Agammaglobulinaemia Tyro Kinase, Atk, B Cell Progenitor Kinase, Bpk;
Ec: 2.7.1.112
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Btk, Agmx1, Atk, Bpk
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21b
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1.112 BRENDA
Primary referenceSolution structure and phosphopeptide binding of the SH2 domain from the human Bruton's tyrosine kinase., Huang KC, Cheng HT, Pai MT, Tzeng SR, Cheng JW, J Biomol NMR. 2006 Sep;36(1):73-8. Epub 2006 Sep 13. PMID:16969585
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (619 Kb) [Save to disk]
  • Biological Unit Coordinates (2ge9.pdb1.gz) 31 Kb
  • CSU: Contacts of Structural Units for 2GE9
  • Original NMR restraints for 2GE9 from PDB
  • Retrieve 2GE9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GE9 from S2C, [Save to disk]
    • View 2GE9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2GE9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GE9, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ge9] [2ge9_A]
  • SWISS-PROT database: [Q06187]
  • Domain organization of [BTK_HUMAN] by SWISSPFAM
  • Domain found in 2GE9: [SH2 ] by SMART
    • Other resources with information on 2GE9
  • Community annotation for 2GE9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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