2GG2	Hydrolase	date	Mar 23, 2006
title	Novel Bacterial Methionine Aminopeptidase Inhibitors
authors	A.G.Evdokimov, M.E.Pokross, R.L.Walter, M.Mekel
compound		source
Molecule: Methionine Aminopeptidase Chain: A Synonym: Map, Peptidase M Ec: 3.4.11.18 Engineered: Yes		Organism_scientific: Escherichia Coli K12 Organism_taxid: 83333 Strain: K-12 Gene: Map Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28
symmetry	Space Group: P 1 21 1	R_factor 0.136 R_Free 0.153
crystal cell	length a length b length c angle alpha angle beta angle gamma 39.372 63.204 52.508 90.00 109.55 90.00
method	X-Ray Diffraction	resolution	1.00 Å
ligand	CO, NA, U12 BindingDB	enzyme	Hydrolase E.C.3.4.11.18 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors., Evdokimov AG, Pokross M, Walter RL, Mekel M, Barnett BL, Amburgey J, Seibel WL, Soper SJ, Djung JF, Fairweather N, Diven C, Rastogi V, Grinius L, Klanke C, Siehnel R, Twinem T, Andrews R, Curnow A, Proteins. 2007 Feb 15;66(3):538-46. PMID:17120228

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk] Biological Unit Coordinates (2gg2.pdb1.gz) 101 Kb LPC: Ligand-Protein Contacts for 2GG2 CSU: Contacts of Structural Units for 2GG2 Likely Quarternary Molecular Structure file(s) for 2GG2 Structure Factors (799 Kb) Retrieve 2GG2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GG2 from S2C, [Save to disk] Re-refined 2gg2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GG2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GG2

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GG2, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2gg2_A] [2gg2] SWISS-PROT database: [P0AE18] Domain organization of [AMPM_ECOLI] by SWISSPFAM

Other resources with information on 2GG2

Community annotation for 2GG2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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