2GGO Transferase date Mar 24, 2006
title Crystal Structure Of Glucose-1-Phosphate Thymidylyltransfera Sulfolobus Tokodaii
authors V.Rajakannan, T.Mizushima, A.Suzuki, R.Masui, S.Kuramitsu, T.Yama
compound source
Molecule: 401aa Long Hypothetical Glucose-1-Phosphate Thymidylyltransferase;
Chain: A
Ec: 2.7.7.24
Engineered: Yes
 Organism_scientific: Sulfolobus Tokodaii
Organism_taxid: 111955
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: H 3
R_factor 0.222 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
122.999 122.999 94.884 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand
enzyme Transferase E.C.2.7.7.24 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (2ggo.pdb1.gz) 68 Kb
  • Biological Unit Coordinates (2ggo.pdb2.gz) 201 Kb
  • CSU: Contacts of Structural Units for 2GGO
  • Likely Quarternary Molecular Structure file(s) for 2GGO
  • Structure Factors (772 Kb)
  • Retrieve 2GGO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GGO from S2C, [Save to disk]
  • Re-refined 2ggo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2GGO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2GGO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GGO, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ggo_A] [2ggo]
  • SWISS-PROT database: [Q975F9]
  • Domain organization of [Q975F9_SULTO] by SWISSPFAM
    • Other resources with information on 2GGO
  • Community annotation for 2GGO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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